Molecular characterization of Turkish hazelnut cultivars and genotypes using SSR markers

Muharrem Yılmaz; Ahsen Işık Özgüven; Yıldız Aka Kaçar

Makale detayları

Molecular characterization of Turkish hazelnut cultivars and genotypes using SSR markers

Yazarlar:

Muharrem Yılmaz | Ahsen Işık Özgüven | Yıldız Aka Kaçar

Yayıncı:

Gültekin ÖZDEMİR

Ana Başlıklar:

Pomology and Treatment

Dergi:

International Journal of Agriculture Environment and Food Sciences Vol.8 Issue 1, pp.88-93

Belge Tipi:

Makale

Yayın Tarihi:

3/2024

Belge Dili:

İngilizce

Document ID (Org No.):

2001313914

pISSN:

2618-5946

Anahtar kelimeler:

Özet:

 This study defines the genetic characterization of 16 hazelnut varieties and 64 genotypes. SSR method was used in molecular characterization studies. 18 SSR primers were used. In the SSR method, 118 bands were obtained, and 115 were polymorphic. The similarity coefficient in overall genotypes were between 0.12 and 0.98 in SSR andthe polymorphism rate of the primer pairs used was calculated as 98.0. The lowest polymorphism information content value 0.542 was obtained from the CAC- C 028 locus, and the highest polymorphism information content value 0.987 was obtained from the CAC- B 113 locus. The average polymorphism information content value was 0.786. The total discrimination power values of SSR loci were determined as 17.98; the lowest 0.748 discrimination power value was obtained from the CAC- B 020 locus, while the highest 1.404 discrimination power value was obtained from the CAC- A 024 b locus. The genotypesclustering positions across the dendograms were essentially correlated with their geographic origins. This result shows that genetic origin plays an important role in terms of classification of genotypes in hazelnut.

 This study defines the genetic characterization of 16 hazelnut varieties and 64 genotypes. SSR method was used in molecular characterization studies. 18 SSR primers were used. In the SSR method, 118 bands were obtained, and 115 were polymorphic. The similarity coefficient in overall genotypes were between 0.12 and 0.98 in SSR andthe polymorphism rate of the primer pairs used was calculated as 98.0. The lowest polymorphism information content value 0.542 was obtained from the CAC- C 028 locus, and the highest polymorphism information content value 0.987 was obtained from the CAC- B 113 locus. The average polymorphism information content value was 0.786. The total discrimination power values of SSR loci were determined as 17.98; the lowest 0.748 discrimination power value was obtained from the CAC- B 020 locus, while the highest 1.404 discrimination power value was obtained from the CAC- A 024 b locus. The genotypesclustering positions across the dendograms were essentially correlated with their geographic origins. This result shows that genetic origin plays an important role in terms of classification of genotypes in hazelnut.

 This study defines the genetic characterization of 16 hazelnut varieties and 64 genotypes. SSR method was used in molecular characterization studies. 18 SSR primers were used. In the SSR method, 118 bands were obtained, and 115 were polymorphic. The similarity coefficient in overall genotypes were between 0.12 and 0.98 in SSR andthe polymorphism rate of the primer pairs used was calculated as 98.0. The lowest polymorphism information content value 0.542 was obtained from the CAC- C 028 locus, and the highest polymorphism information content value 0.987 was obtained from the CAC- B 113 locus. The average polymorphism information content value was 0.786. The total discrimination power values of SSR loci were determined as 17.98; the lowest 0.748 discrimination power value was obtained from the CAC- B 020 locus, while the highest 1.404 discrimination power value was obtained from the CAC- A 024 b locus. The genotypesclustering positions across the dendograms were essentially correlated with their geographic origins. This result shows that genetic origin plays an important role in terms of classification of genotypes in hazelnut.

 This study defines the genetic characterization of 16 hazelnut varieties and 64 genotypes. SSR method was used in molecular characterization studies. 18 SSR primers were used. In the SSR method, 118 bands were obtained, and 115 were polymorphic. The similarity coefficient in overall genotypes were between 0.12 and 0.98 in SSR andthe polymorphism rate of the primer pairs used was calculated as 98.0. The lowest polymorphism information content value 0.542 was obtained from the CAC- C 028 locus, and the highest polymorphism information content value 0.987 was obtained from the CAC- B 113 locus. The average polymorphism information content value was 0.786. The total discrimination power values of SSR loci were determined as 17.98; the lowest 0.748 discrimination power value was obtained from the CAC- B 020 locus, while the highest 1.404 discrimination power value was obtained from the CAC- A 024 b locus. The genotypesclustering positions across the dendograms were essentially correlated with their geographic origins. This result shows that genetic origin plays an important role in terms of classification of genotypes in hazelnut.

Makale detayları

Molecular characterization of Turkish hazelnut cultivars and genotypes using SSR markers

Yazarlar:

Muharrem Yılmaz | Ahsen Işık Özgüven | Yıldız Aka Kaçar

Yayıncı:

Gültekin ÖZDEMİR

Ana Başlıklar:

Pomology and Treatment

Dergi:

International Journal of Agriculture Environment and Food Sciences Vol.8 Issue 1, pp.88-93

Belge Tipi:

Makale

Yayın Tarihi:

3/2024

Belge Dili:

İngilizce

Document ID (Org No.):

2001313914

pISSN:

2618-5946

Hazelnut

Molecular characterization

SSR

Sayı

Makale detayları

Molecular characterization of Turkish hazelnut cultivars and genotypes using SSR markers

Yazarlar: Muharrem Yılmaz | Ahsen Işık Özgüven | Yıldız Aka Kaçar

Yayıncı: Gültekin ÖZDEMİR

Ana Başlıklar: Pomology and Treatment

Dergi: International Journal of Agriculture Environment and Food Sciences Vol.8 Issue 1, pp.88-93

Belge Tipi: Makale

Yayın Tarihi: 3/2024

Belge Dili: İngilizce

Document ID (Org No.): 2001313914

pISSN: 2618-5946

Hazelnut

Molecular characterization

SSR

Sayı

Yazarlar:

Muharrem Yılmaz | Ahsen Işık Özgüven | Yıldız Aka Kaçar

Yayıncı:

Gültekin ÖZDEMİR

Ana Başlıklar:

Pomology and Treatment

Dergi:

International Journal of Agriculture Environment and Food Sciences Vol.8 Issue 1, pp.88-93

Belge Tipi:

Makale

Yayın Tarihi:

3/2024

Belge Dili:

İngilizce

Document ID (Org No.):

2001313914

pISSN:

2618-5946